BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B04LP1|AL426639
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 1536 0.0
>3x_Contig1787
Length = 34189
Score = 1536 bits (775), Expect = 0.0
Identities = 775/775 (100%)
Strand = Plus / Minus
Query: 1 gatccaaatcacattcatctacatcttgtaaggtatcgatttctaattctgttgataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9279 gatccaaatcacattcatctacatcttgtaaggtatcgatttctaattctgttgataaat 9220
Query: 61 tggggtaaattttgttacatttgtctaatatttcctgcgagagctgatataacgtatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9219 tggggtaaattttgttacatttgtctaatatttcctgcgagagctgatataacgtatttg 9160
Query: 121 ttggtttcgtaaatattaagaattttttgagtttcggtcttgtgatatgggaggtcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9159 ttggtttcgtaaatattaagaattttttgagtttcggtcttgtgatatgggaggtcataa 9100
Query: 181 aactggaaagatacgctgtatttgttgatacatttgggtctagagccccaattccattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9099 aactggaaagatacgctgtatttgttgatacatttgggtctagagccccaattccattct 9040
Query: 241 gagccggaatattattcgctaattggggagcatttcctccctgttgcagaacctgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9039 gagccggaatattattcgctaattggggagcatttcctccctgttgcagaacctgttgtt 8980
Query: 301 ggacaggcagaataaactgagaggattctgatgatacagaaggtaaaccaaaattgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8979 ggacaggcagaataaactgagaggattctgatgatacagaaggtaaaccaaaattgaaac 8920
Query: 361 ttctattagcgcccgcaggcaccaacacaacttgcaacttaaacattgcaagaaaacgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8919 ttctattagcgcccgcaggcaccaacacaacttgcaacttaaacattgcaagaaaacgat 8860
Query: 421 cacacctgtttgagtttataaaaatactcttgcgaccagttcaatggagttgatttcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8859 cacacctgtttgagtttataaaaatactcttgcgaccagttcaatggagttgatttcaaa 8800
Query: 481 ttgtaaccccaaggacactgccgatagatacaactgtctcgactatttgtttttgttttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8799 ttgtaaccccaaggacactgccgatagatacaactgtctcgactatttgtttttgttttg 8740
Query: 541 ttctttgttgatataatttggttctcttcatttatgaaatgttcaactttaaaatagata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8739 ttctttgttgatataatttggttctcttcatttatgaaatgttcaactttaaaatagata 8680
Query: 601 gaggttttgacagaaatgccgccttcgtttaatatgatttgagaagctaagcgctattgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8679 gaggttttgacagaaatgccgccttcgtttaatatgatttgagaagctaagcgctattgt 8620
Query: 661 attatgtacataaggcaaacacgtaaatatgttaatggttagtgaataatgatatggaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8619 attatgtacataaggcaaacacgtaaatatgttaatggttagtgaataatgatatggaga 8560
Query: 721 agaccgcaacctgagggcctgtcattcctaacatcagagattttaagtaagattc 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8559 agaccgcaacctgagggcctgtcattcctaacatcagagattttaagtaagattc 8505
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6720
Number of Sequences: 1807
Number of extensions: 6720
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)